Part I: Background.- Sequence Analysis.- The SeqAn library (version 1 & 2).- Modern C++.- Part II: SeqAn3.- The design of SeqAn3.- Library structure and small modules.- The Alphabet module.- The Range module.- The Input/Output module.- The Search module.- The Alignment module.- Part III: Lambda.- Lambda: an application built with SeqAn.- Part IV: Conclusion and appendix.- Conclusion.- Appendix.- References.
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