RNA Abundance Analysis: Methods and Protocols

Book Overview

1. SuperSAGE: Powerful Serial Analysis of Gene Expression

Hideo Matsumura, Naoya Urasaki, Kentaro Yoshida, Detlev H. Kr?ger, G?nter Kahl, and Ryohei Terauchi

2. Northern Blot Analysis for Expression Profiling of mRNAs and Small RNAs

Ankur R. Bhardwaj, Ritu Pandey, Manu Agarwal, and Surekha Katiyar-Agarwal

3. Construction of RNA-Seq Libraries from Large and Microscopic Tissues for the Illumina Sequencing Platform

Hagop S. Atamian and Isgouhi Kaloshian

4. Strand-Specific RNA-Seq Applied to Malaria Samples

Nadia Ponts, Duk-Won D. Chung, and Karine G. Le Roch

5. RNA In Situ Hybridization in Arabidopsis

Miin-Feng Wu and Doris Wagner

6. Laser Microdissection of Cells and Isolation of High-Quality RNA After Cryosectioning

Marta Barcala, Carmen Fenoll, and Carolina Escobar

7. Detection and Quantification of Alternative Splicing Variants Using RNA-Seq

Douglas W. Bryant, Jr., Henry D. Priest, and Todd C. Mockler

8. Separating and Analyzing Sulfur-Containing RNAs with Organomercury Gels

Elisa Biondi and Donald H. Burke

9. RNAse Mapping and Quantitation of RNA Isoforms

Lakshminarayan K. Venkatesh, Olufemi Fasina, and David J. Pintel

10. Detection and Quantification of Viral and Satellite RNAs in Plant Hosts

Sun-Jung Kwon, Jang-Kyun Seo, and A.L.N. Rao

11. In Situ Detection of Mature miRNAs in Plants Using LNA-Modified DNA Probes

Xiaozhen Yao, Hai Huang, and Lin Xu

12. Small RNA Isolation and Library Construction for Expression Profiling of Small RNAs from Neurospora and Fusarium Using Illumina High Throughput Deep Sequencing

Gyungsoon Park and Katherine A. Borkovich

13. Isolation and Profiling of Protein-Associated Small RNAs

Hongwei Zhao, Yifan Lii, Pei Zhu, and Hailing Jin

14. New Virus Discovery by Deep Sequencing of Small RNAs

Kashmir Singh, Ravneet Kaur, and Wenping Qiu

15. Global Assembly of Expressed Sequence Tags (ESTs)

Foo Cheung

16. Computational Analysis of RNA-Seq

Scott A. Givan, Christopher A. Bottoms, and William G. Spollen

17. Identification of MicroRNAs and Natural Antisense Transcript-Originated Endogenous siRNAs from Small-RNA Deep Sequencing Data

Weixiong Zhang, Xuefeng Zhou, Xiang Zhou, and Jing Xia

• Format: Paperback
• Language: English
• ISBN: 1493959166
• ISBN13: 9781493959167
• Release Date: August 2016
• Publisher: Humana
• Length: 231 Pages
• Weight: 0.96 lbs.
• Dimensions: 0.5" x 7.0" x 10.0"